Daniel M. Stoebel
Professor of Biology
F.W. Olin Science Center, Room 2364
1250 N. Dartmouth Ave.
Claremont, CA 91711
909.607.1141
stoebel@g.hmc.edu
Education and Professional Experience
- B.A., Biology, Pomona College
- PhD, Ecology and Evolution, Stony Brook University
- Postdoctoral Research Fellow, Trinity College, University of Dublin
- Postdoctoral Research Fellow, University of Houston
Teaching Interests
My teaching interests span molecular and evolutionary genetics, from first years to seniors, in lab, seminar, and lecture settings. I also take great pleasure teaching statistics and courses at the interface of biology and the humanities.
In past years, I have taught:
- Bio 52: Introduction to Biology
- Bio 54: Introductory Biology Lab
- Bio 113: Molecular Genetics
- Bio 154: Biostatistics
- Bio 164: Genetics
- Bio/Chem 189: Current Topics in Molecular Biology and Biochemistry
- History 179J: Genetics and Race
- Writing 1: Introduction to Academic Writing
Research Interests
Work in my lab focuses on the molecular biology and evolution of bacterial regulatory networks. The E. coli global transcription regulator RpoS is the focus of work, because it allows for the integration of molecular biology, physiology and evolution. Projects include studying how RpoS levels vary across strains and environments, measuring the affect of this variation in RpoS level on the transcriptome, studying how RpoS interacts with other transcription factors to influence patterns of transcription, and exploring how the regulation of RpoS levels varies in pathogenic relatives of laboratory E. coli.
I encourage students at HMC or any of the other Claremont Colleges for whom this sounds interesting to contact me. I regularly invite students of all backgrounds into my lab.
Selected Publications
(* indicates work done as an undergraduate)
Adams, Josephine*, Johnson Hoang*, Emily Petroni*, Ethan Ashby*, Johanna Hardin, and Daniel M. Stoebel. 鈥�.鈥�&苍产蝉辫;mSystems, 8: e0066323.
Beck, Christina*, Sayde Perry*,聽Daniel M. Stoebel, and Jane M. Liu. 鈥溾�澛�Journal of Bacteriology,听203:别00044-21.听.00044-21
Fitzgerald, Stephen, Stefani C. Kary, Ebtihal Y. Alshabib, Keith D. MacKenzie, Daniel M. Stoebel, Tzu-Chiao Chao, and Andrew D. S. Cameron. 鈥溾�� 2020. Nucleic Acids Research 48: 10184鈥�98.
Hamilton, Vivien, and Daniel. M. Stoebel. 2020. . Isis 111: 623鈥�30.
Bush, E. C., A. E. Clark*, C. A. DeRanek*, A. Eng*, J. Forman*, K. Heath*, A. B. Lee*, D. M. Stoebel, Z. Wang*, M. Wilber*, and H. Wu*. 2018. . BMC Bioinformatics, 19:32. doi: 10.1101/188599
G. T. Wong*, R. P. Bonocora, A. N. Schep*, S. M. Beeler*, A. J. Lee Fong, L. M. Shull*, L. E. Batachari*, M. Dillon*, C. J. Becker*, C. Evans*, E. C. Bush, J. Hardin, J. T. Wade, and D. M. Stoebel. 2017. . Journal of Bacteriology, 199: e00755-16. doi: 10.1128/JB.00755-16.
C. Evans*, J. Hardin, and D. M. Stoebel. 2017. . Briefings in Bioinformatics. doi: 10.1093/bib/bbx008.
Y. Wang, C. D. Arenas, D. M. Stoebel, K. Flynn, E. Knapp, M. M. Dillon, A. W眉nsche, P. J. Hatcher, F. B.-G. Moore, V. S. Cooper, and T. F. Cooper. 2016. . PNAS, 113:5047-5052.
E. Snyder*, D. M. Gordon, and D. M. Stoebel. 2012. . G3: Genes | Genomes | Genetics, 2:1341-4
Stoebel, D. M. & C. J. Dorman. 2010. . Molecular Biology and Evolution, 27: 2105-2112.
Stoebel, D. M., K. Hokamp, M. S. Last & C. J. Dorman. 2009. . PLoS Genetics, 5: e1000671
Stoebel, D. M., A. Free & C. J. Dorman. 2008. . Microbiology, 154: 2533-2545.
Stoebel, D. M., A. M. Dean & D. E. Dykhuizen. 2008. Genetics, 178:1653-1660.
Stoebel, D. M. 2005. . Molecular Biology and Evolution, 22:683-690.